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Fig. 5 | BMC Bioinformatics

Fig. 5

From: ppiGReMLIN: a graph mining based detection of conserved structural arrangements in protein-protein interfaces

Fig. 5

Protease conserved substructures. F1, F2 and F3 show some interesting patterns and some of their respective input graphs. Nodes and interactions in patterns might contain only a subset of the labels of its corresponding nodes in the graphs. For example, red nodes in F3 are labeled negative, meanwhile their corresponding nodes (in light green) are labeled negative and acceptor. Also, patterns may have multiple mappings to their corresponding input graphs. For example, the acceptor node from F3 (in blue) may be mapped separately to the acceptor or acceptor/donor nodes in graph 1

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BMC Bioinformatics

ISSN: 1471-2105

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