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Fig. 7 | BMC Bioinformatics

Fig. 7

From: ppiGReMLIN: a graph mining based detection of conserved structural arrangements in protein-protein interfaces

Fig. 7

BCL-2 conserved substructures. F4, F5, F6 show some interesting patterns and some of their respective input graphs. a Input graphs colored according to its node labels. b The same input graphs with its nodes colored according to their source chain in the protein. In this example, blue nodes represent atoms from the BCL-2 antiapoptotic part of the protein complex, and green nodes represent atoms from the other protein chain in the complex. The larger green atoms atoms are part of binding hotspot residues described in literature relative to the motif LXXXXD

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BMC Bioinformatics

ISSN: 1471-2105

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