Fig. 3

A pictorial representation of the number of fragments contained in Rosetta standard’s 9-mer and 3-mers files (the upper part of the figure was taken from the PDB, sequence tab of the Atx1 Metallochaperone Protein – PDBID: 1CC8). In the case of 9-mers, the blue arrows point to the positions where there is a set of 25 candidate fragments of length 9. In the example above, assuming that the protein is of length 32, the 9-mer fragment library ends at position 23. In the case of 3-mers, there are 200 candidate fragments per position. Here the 3-mer fragment library ends at position 30