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Table 4 Blind assessment results of standard predictions’ 20,000 decoys against SS-based predictions’ 2000 decoys. Although our approach shows slightly better outcomes, there is no significant difference between the two sets of results

From: Enhancing fragment-based protein structure prediction by customising fragment cardinality according to local secondary structure

 

First model

Best model

Average of the Best 5 models

20,000 Decoys (Std. Predictions)

vs

2000 Decoys (SS-based. Predictions)

12/24 (50%) + 0.4%

13/24 (54%) + 4.6%

10/24 (42%) + 0.3%

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BMC Bioinformatics

ISSN: 1471-2105

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