Table 2 Protein sequence features
From: DeepFrag-k: a fragment-based deep learning approach for protein fold recognition
Feature | Type | Dimension |
|---|---|---|
Sequence Composition | Frequency of Function Group | 10 |
Information Entropy | 2 | |
Distribution | 20 | |
Transition | 45 | |
Physicochemical properties | Pseudo Amino Acid Composition | 40 |
Discrete Wavelet Transformation | 42 | |
Evolutionary Information | P-PSSM | 400 |
PSSM-DC | 400 | |
Bi-Gram PSSM | 400 | |
ED-PSSM | 400 |