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Table 1 The SNPs that the CMM method identifies from both the SUD and the AD data sets

From: Coupled mixed model for joint genetic analysis of complex disorders with two independently collected data sets

SNP

SUD rank

AD rank

Chr.

Chr. position

Gene

rs2131691

1

1

11

26574855

ANO3

rs1709317

5

8

2

23536638

KLHL29

rs4713797

6

10

6

34490756

PACSIN1

rs224534

12

3

17

3583408

TRPV1

rs1057744

16

11

14

105150705

JAG2

  1. The SNPs are ranked by the absolute values of their estimated effect sizes, and showed in the “SUD rank” and “AD rank” columns. The information of whether a SNP is located within a region of a gene is taken from the Database for Single Nucleotide Polymorphisms (dbSNP) [60], and listed in the “Gene” column
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BMC Bioinformatics

ISSN: 1471-2105

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