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Table 2 The minor allel frequencies (MAFs) of the five identified SNPs in the case (“AD” column) and the control (“C” column) samples. The overall MAFs (in “all” column are reported for reference

From: Coupled mixed model for joint genetic analysis of complex disorders with two independently collected data sets

 

AD

SUD

All

C

AD

p value

All

C

SUD

p value

rs2131691

0.47

0.41

0.44

4.78E05

0.47

0.46

0.48

4.64E-01

rs1709317

0.36

0.31

0.45

6.82E−06

0.27

0.30

0.22

2.28E−02

rs4713797

0.48

0.47

0.41

6.04E−04

0.41

0.45

0.37

5.32E−02

rs224534

0.33

0.28

0.43

1.41E−06

0.25

0.26

0.25

7.91E−01

rs1057744

0.49

0.45

0.42

4.81E−04

0.39

0.42

0.35

3.71E−02

  1. The p values of the student’s t tests are also reported. The statistically significant p values which are below the threshold of 0.05 are shown in bold
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BMC Bioinformatics

ISSN: 1471-2105

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