Table 1 Statistically significant survival difference of modules generated by four methods
| Module | Size | Group with increased Survival | p Value (Log-rank test) | q Value (B&H FDR) |
|---|---|---|---|---|
| TPSC-w (2/13) | ||||
| G1 | 518 | Downregulated | 0.0430 | 0.2795 |
| G12 | 261 | Upregulated | 0.0006 | 0.0077 |
| TPSC-1 (4/24) | ||||
| M6 | 57 | Upregulated | 0.0460 | 0.2760 |
| M16 | 89 | Downregulated | 0.0250 | 0.2000 |
| M21 | 358 | Downregulated | 0.0150 | 0.1800 |
| M23 | 260 | Upregulated | 0.0120 | 0.1800 |
| lmQCM (2/13) | ||||
| Q4 | 109 | Upregulated | 0.0019 | 0.0247 |
| Q7 | 43 | Downregulated | 0.0280 | 0.1820 |
| WGCNA (2/17) | ||||
| W2 | 307 | Upregulated | 0.0130 | 0.2210 |
| W13 | 192 | Downregulated | 0.0490 | 0.4165 |