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Table 1 Statistically significant survival difference of modules generated by four methods

From: TPSC: a module detection method based on topology potential and spectral clustering in weighted networks and its application in gene co-expression module discovery

Module Size Group with increased Survival p Value (Log-rank test) q Value (B&H FDR)
TPSC-w (2/13)
 G1 518 Downregulated 0.0430 0.2795
 G12 261 Upregulated 0.0006 0.0077
TPSC-1 (4/24)
 M6 57 Upregulated 0.0460 0.2760
 M16 89 Downregulated 0.0250 0.2000
 M21 358 Downregulated 0.0150 0.1800
 M23 260 Upregulated 0.0120 0.1800
lmQCM (2/13)
 Q4 109 Upregulated 0.0019 0.0247
 Q7 43 Downregulated 0.0280 0.1820
WGCNA (2/17)
 W2 307 Upregulated 0.0130 0.2210
 W13 192 Downregulated 0.0490 0.4165