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Fig. 3 | BMC Bioinformatics

Fig. 3

From: tidyMicro: a pipeline for microbiome data analysis and visualization using the tidyverse in R

Fig. 3

Example exploratory visualizations. a Principle component plot calculated from centered log ratio transformed genus level taxa counts, colored by MSRA infection. b Principle coordinate plot calculated from genus level Bray–Curtis beta diversity with normal ellipses, colored by MSRA infection. c Stacked bar charts of average genus level taxa abundances by MSRA infection. d Heatmap of Spearman correlations between centered log ratio transformed genus level taxa counts and subjects’ age

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