Table 2 Categories that relevant NA methods belong to
From: Data-driven biological network alignment that uses topological, sequence, and functional information
NA method | Method group | Feature type | (Un)supervised? |
|---|---|---|---|
WAVE | Within-network-only | Topology (graphlets) | Unsupervised |
SANA | Within-network-only | Topology (graphlets) | Unsupervised |
PrimAlign | Integrated-within- and-across-network | Topology (PageRank-like) and sequence | Unsupervised |
TARA | Within-network-only | Topology (graphlets) | Supervised |
TARA-TS | Integrated-within- and-across-network | Topology (graphlets) and sequence | Supervised |
TARA++ | N/A (TARA++ is the overlap of TARA’s and TARA-TS’s predicted protein-GO term annotations) | ||