Skip to main content

Table 3 Precision-Recall AUC was comparable to PEAS results in GM12878

From: Self-organizing maps with variable neighborhoods facilitate learning of chromatin accessibility signal shapes associated with regulatory elements

RPKM cutoff SOM-VN (5 RPKM) PEAS (all features) PEAS (shape only)
Enhancer PR AUC 0.81 0.85 0.75