Fig. 5
From: lncEvo: automated identification and conservation study of long noncoding RNAs
The structure of the output files, with an analysis of sequences from Canis lupus familiaris compared with human lncRNAs shown as an example. The QC folder contains multiple quality reports, with multiQC.html containing data from a number of software utilities. The set of predicted lncRNAs is kept in the PREDICTION folder, whereas the assembled transcriptome is available in the species_name_final.gtf and species_name_final.fasta files. The file hsapiens.clfamiliaris.over.chain.gz is the cross-species alignment chain file. Finally, the HTML files contain interactive reports