Table 1 Metagenome assembly statistics from CAMI datasets
From: geneRFinder: gene finding in distinct metagenomic data complexities
Low | Medium | High | |
|---|---|---|---|
Assembly file size | 149M | 537M | 2,7G |
Genomes | 40 (22 unique; 18–6 real and 12 evolved—common strains) | 132 (32 unique; 100–87 real and 13 evolved—common strains) | 596 (197 unique; 399–345 real and 54 evolved—common strains) |
Circular elements (plasmids, viruses and other circular elements) | 20 | 100 | 478 |
N50 | 163,697 | 191,017 | 249,005 |
L50 | 230 | 686 | 2,899 |
Contigs | 12,857 | 38,584 | 39,171 |