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Table 1 Experimentally labeled non-coding variant loci in three human cell lines

From: A semi-supervised deep learning approach for predicting the functional effects of genomic non-coding variations

Cell lines Positive Negative Total
Lymphoblastoid (GM12878) 683 2745 3428
Liver carcinoma (HepG2) 523 1432 1955
Erythroleukemia (K562) 340 1356 1696
  1. Positive a locus affecting gene expression, negative a locus showing no effect