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Table 1 Experimentally labeled non-coding variant loci in three human cell lines

From: A semi-supervised deep learning approach for predicting the functional effects of genomic non-coding variations

Cell lines

Positive

Negative

Total

Lymphoblastoid (GM12878)

683

2745

3428

Liver carcinoma (HepG2)

523

1432

1955

Erythroleukemia (K562)

340

1356

1696

  1. Positive a locus affecting gene expression, negative a locus showing no effect
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BMC Bioinformatics

ISSN: 1471-2105

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