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Fig. 8 | BMC Bioinformatics

Fig. 8

From: Density Peak clustering of protein sequences associated to a Pfam clan reveals clear similarities and interesting differences with respect to manual family annotation

Fig. 8

Coverage computed on proteins in UniRef50 including at least a region of the PUA clan according to Pfam-A. By running the profile-HMMs derived from the metaclusters, we search for hits covering at least 75% or 100% of a PUA region. The graph shows the fraction of the PUA clan covered using an increasing number of metaclusters. After after the 15th metacluster, the fraction does not improve, because of some redundancy in PUA MCS, which are 19. Also, MCs appearing after the 19th do not map to a PUA clan family, and do not contribute to any increase in the coverage

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BMC Bioinformatics

ISSN: 1471-2105

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