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Fig. 2 | BMC Bioinformatics

Fig. 2

From: PIKE-R2P: Protein–protein interaction network-based knowledge embedding with graph neural network for single-cell RNA to protein prediction

Fig. 2

Visualizations of cell clustering results based on different data. The data predicted by PIKE-R2P disperses different cell clusters almost equally well as the ground truth protein data on the CBMC dataset. a cell clustering result based on RNA, SC = 0.069; b cell clustering result based on ground truth measurement of protein abundance, SC = 0.305; c cell clustering result based on PIKE-R2P prediction, SC = 0.309; d cell clustering result based on cTP-net prediction, SC = 0.135

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BMC Bioinformatics

ISSN: 1471-2105

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