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Table 1 The four hyperparameter sets for XGBoost considered in the analysis during the ranking process

From: A new method for exploring gene–gene and gene–environment interactions in GWAS with tree ensemble methods and SHAP values

Set

\({\eta }\)

colsample_bytree

subsample

colsample_bylevel

max_depth

1

0.01

0.9

0.9

0.9

2

2

0.05

0.8

0.8

0.8

2

3

0.05

0.8

0.8

0.8

3

4

0.1

0.8

0.8

0.8

2