Skip to main content

Table 3 Contig statistics for Flye assemblies of human reads before and after chimera splitting using Alvis’ chimera detection

From: Alvis: a tool for contig and read ALignment VISualisation and chimera detection

Assembly

Before

After

Number of contigs

247

251

Total bases

8,295,215

8,945,628

Mean contig length

33,583

35,640

Shortest

522

520

Longest

135,585

135,924

N50

50,325

50,524

N90

20,595

23,079