Skip to main content
Fig. 2 | BMC Bioinformatics

Fig. 2

From: Instance-based error correction for short reads of disease-associated genes

Fig. 2

An example of read correction on eight reads. The base-type frequency f(r) and dominance value p(r) of a base are shown below that base. For the columns of bases, the dominant nucleotide types are in bold and the erroneous bases are in the red color. The updated sequence is on the top and the correction details are listed in the right. For example, in column 26, there are two dominant nucleotides (G and C). f(C) is larger than f(G), so the nucleotide C is used to update the sequence, and the erroneous base A (position[26]) in read4 is corrected to C. For read3, the third base after ranking is below the threshold, so read3 is labeled ‘out’ and deleted from the extracted subset

Back to article page