ModularBoost: an efficient network inference algorithm based on module decomposition

BMC Bioinformatics

Table 1 Module identification evaluation of the curated GSD and PIDC E. coli network using \(F_{rr}\)

Methods	GSD-1	GSD-50	GSD-70	E. coli-S	E. coli-LL	E. coli-LH
ICA-FDR	0.307	0.307	0.268	0.355	0.345	0.337
ICA-FDR2	0.249	0.249	0.212	0.240	0.234	0.227
ICA-zscore	0.172	0.111	0.111	0.318	0.359	0.323
PCA decomposition	0.252	0.213	0.111	0.287	0.279	0.285
K-means	0.288	0.288	0.288	0.247	0.230	0.240

ISSN: 1471-2105