From: ModularBoost: an efficient network inference algorithm based on module decomposition
Network | module | Genes |
---|---|---|
PrE | module 1 | XBP1 GATA6 MYBL2 RHOX6 JUN |
module 2 | ETS1 EGR1 POU5F1 ELF3 | |
module 3 | DNMT3A SIX1 SMAD7 | |
module 4 | EPAS1 BHLHE40 POU5F1 | |
MEF | module 1 | HMGA2 ASCL1 FOS ATF3 ETS1 PRRX1 JUN NFIC FOSB |
module 2 | FOS EBF1 PLAGL1 FOSB SOX9 KLF4 | |
module 3 | NFIC NFIA NR2F2 | |
DE | module 1 | CDX1 JUND |
module 2 | PRDM1 HAND1 FOXF1 HOXB6 SOX5 SOX17 TCF7 MAF | |
module 3 | OTX2 NFIB ZIC3 CDX1 LEF1 ZFX TFAP2A ZEB1 | |
module 4 | GATA6 T EOMES GATA4 SOX2 MSX1 PITX2 POU5F1 NANOG | |
module 5 | T CDX1 JUND ZFP42 ARID3A GATA6 HAND1 ZFX |