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Table 3 The list of gene module gold standard for three SCODE networks

From: ModularBoost: an efficient network inference algorithm based on module decomposition

Network module Genes
PrE module 1 XBP1 GATA6 MYBL2 RHOX6 JUN
module 2 ETS1 EGR1 POU5F1 ELF3
module 3 DNMT3A SIX1 SMAD7
module 4 EPAS1 BHLHE40 POU5F1
MEF module 1 HMGA2 ASCL1 FOS ATF3 ETS1 PRRX1 JUN NFIC FOSB
module 2 FOS EBF1 PLAGL1 FOSB SOX9 KLF4
module 3 NFIC NFIA NR2F2
DE module 1 CDX1 JUND
module 2 PRDM1 HAND1 FOXF1 HOXB6 SOX5 SOX17 TCF7 MAF
module 3 OTX2 NFIB ZIC3 CDX1 LEF1 ZFX TFAP2A ZEB1
module 4 GATA6 T EOMES GATA4 SOX2 MSX1 PITX2 POU5F1 NANOG
module 5 T CDX1 JUND ZFP42 ARID3A GATA6 HAND1 ZFX