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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Comparing de novo transcriptome assembly tools in di- and autotetraploid non-model plant species

Fig. 3

Basic assembly statistics. The proportion of reads (fragments) that mapped back to the assemblies (P fragments mapped), the proportion of good mappings i.e. both of the reads mapped on the same contig, with same orientation and without overlapping the ends of the contig (P good mappings), the proportion of transcripts with a length less than 300 bp (P contigs < 300 bp) and the proportion of contigs that are not covered by reads (P contigs uncovered) for each assembler (SO = SOAPdenovo-Trans, TL = TransLiG, TR = Trinity) is shown for the genera Acer, Vaccinium and Arabidopsis in diploid (2×) and autotetraploid (4×) species

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