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Table 1 Sample description

From: Comparing de novo transcriptome assembly tools in di- and autotetraploid non-model plant species

Species Ploidy Library type Tissue Selection Strandness Read length Average M reads after preprocessing
Acer platanoides Diploid Paired-end Leaves poly-A RF 150 bp 25.1
Acer pseudoplatanus Tetraploid Paired-end Leaves poly-A RF 150 bp 29.1
Vaccinium arboreum Diploid Paired-end Roots rRNA depletion FR 101 bp 12.9
Vaccinium corymbosum Tetraploid Paired-end Roots rRNA depletion FR 101 bp 26.9
Arabidopsis thaliana Diploid Paired-end Aerial parts rRNA depletion* non* 150 bp 21.6
Arabidopsis thaliana Tetraploid Paired-end Aerial parts rRNA depletion* non* 150 bp 21.4
  1. *Inferred from the data sets during our analyses
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