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Fig. 1 | BMC Bioinformatics

Fig. 1

From: Deciphering hierarchical organization of topologically associated domains through change-point testing

Fig. 1

HiCKey workflow. a Illustration of hierarchical organizations of chr1:100–103 Mb from in situ Hi-C data of GM12878. The potential four-layer organization is denoted by dotted lines. The non-overlapping TADs were obtained from a previous study [12]. b The workflow of HiCKey. HiCKey takes interaction matrices (or interaction list) as input, iteratively searches TADs, and outputs their hierarchies. It can also provide additional steps for TAD comparison and data visualization. c Comparing two sets of TADs structures

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BMC Bioinformatics

ISSN: 1471-2105

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