Table 5 Use of RNA-Seq evidence to improve annotation of untranslated regions to aid in promoter mining and epigenetic studies
| Â | Number of FINDER1 transcripts having TSS better than BRAKER2 | Number of BRAKER2 transcripts having TSS better than FINDER1 |
|---|---|---|
Arabidopsis thaliana | 15,063 (65%) | 8022 (35%) |
Oryza sativa | 11,089 (66%) | 5762 (34%) |
Zea mays (NCBI) | 20,721 (76%) | 6628 (24%) |
Zea mays (AGPv3) | 7618 (28%) | 19,731 (72%) |
Zea mays (AGPv4) | 18,114 (69%) | 8297 (31%) |
Caenorhabditis elegans | 8681 (33%) | 17,730 (67%) |
Drosophila melanogaster | 10,238 (63%) | 5917 (37%) |
Homo sapiens | 10,158 (74%) | 3486 (26%) |
Hordeum vulgare | 10,373 (65%) | 5607 (35%) |