Fig. 4
From: Modeling transcriptional regulation using gene regulatory networks based on multi-omics data sources
Intronic and Promoter TFBS are important for predicting gene expression. (a) PCC and (b) MSE obtained from the expression prediction of GM12878 and K56 TGs using models built from GRNs containing promoter and distal TFBS. (c) PCC and (d) MSE produced by models predicting expression for GM12878 and K562 TGs built using GRNs containing intronic TFBS versus those built without them. The non-intronic TFBS input weights were derived from Pos GRN for both cell types