From: Searching for universal model of amyloid signaling motifs using probabilistic context-free grammars
motif | trn | val: PDBfrag | tst: PDBfull | tst: NLReff | tst: DisProt | ||
---|---|---|---|---|---|---|---|
Family | Size | AP | YI | Recall@ | Recall@ | Recall@ | AP |
 |  |  |  | FPR0.01 | FPR0.01 | FPR0.001 |  |
BASS1 | 210 | 0.93/0.95 | 0.98/0.98 | 0.99 | 0.99 | 0.97 | 1.00 |
BASS2 | 329 | 0.92/0.94 | 0.96/0.97 | 0.98 | 0.99 | 0.97 | 1.00 |
BASS3 | 145 | 0.92/0.93 | 0.98/0.97 | 0.97 | 0.98 | 0.92 | 0.99 |
BASS4 | 127 | 0.77/0.93 | 0.96/0.97 | 1.00 | 1.00 | 0.96 | 1.00 |
BASS5 | 50 | 0.83/0.86 | 0.99/0.99 | 0.85 | 0.90 | 0.81 | 0.97 |
BASS6 | 111 | 0.89/0.89 | 0.97/0.98 | 0.91 | 0.97 | 0.89 | 0.97 |
BASS7 | 17 | 0.85/– | 0.95/– | 0.97 | 0.92 | 0.97 | 0.98 |
BASS8 | 14 | 0.79/– | 0.93/– | 1.00 | 1.00 | 0.96 | 1.00 |
BASS9 | 38 | 0.42/0.63 | 0.87/0.91 | 0.79 | 0.90 | 0.79 | 0.96 |
BASS10 | 7 | 0.57/– | 0.99/– | 1.00 | 1.00 | 1.00 | 1.00 |