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Table 5 The average AUC scores for 243 drugs in GDSC for the cross validation test

From: Super.FELT: supervised feature extraction learning using triplet loss for drug response prediction with multi-omics data

 

Super.FELT

MOLIF

AE

ANNF

MOLI

Super.FELT E

Super.FELT M&C

Auto BorutaRF

SVM

Validation AUC

with set 1

0.727

0.711

0.712

0.694

0.715

0.723

0.602*

  

Validation AUC

with set 2

0.727

0.697

0.715*

0.699

0.71

0.726

0.598

  

Validation AUC

with set 3

0.728

0.698

0.69

0.697

0.704

0.726

0.597

  

Validation AUC

with set 4

0.73*

0.7137

0.707

0.696

0.694

0.73

0.592

0.747

0.702

Validation AUC

with set 5

0.72

0.707

0.672

0.698

0.705

0.727

0.583

  

Validation AUC

with set 6

0.726

0.699

0.708

0.693

0.713

0.724

0.595

  

Validation AUC

with set 7

0.727

0.703

0.712

0.694

0.721*

0.715

0.597

  

Validation AUC

with set 8

0.727

0.7138*

0.684

0.703*

0.719

0.732*

0.593

  

Test AUC

0.729

0.711

0.719

0.706

0.72

0.728

0.593

0.698

0.7

  1. A bold value in the Test AUC indicates a method with the best performance
  2. *bold values indicate the best validation AUC among eight hyperparameter sets