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Table 1 Comparison of the graph decomposition results of two k values

From: A tri-tuple coordinate system derived for fast and accurate analysis of the colored de Bruijn graph-based pangenomes

k

Graph

All cSupBs

Root CSupB

Max level

Simple cSupB

22

Graph

118 (74 + 20 + 14 + 9 + 1)

74

5

91 (65 + 26)

18

Graph1

55 (37 + 8 + 6 + 4)

37

4

44 (33 + 11)

 

Graph2

64 (37 + 15 + 7 + 4 + 1)

37

5

47 (32 + 15)

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BMC Bioinformatics

ISSN: 1471-2105

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