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Table 1 Selected miRNA modules that are enriched in spatial miRNA clusters

From: Simultaneous learning of individual microRNA-gene interactions and regulatory comodules

Index

q-value

Overlap miRNAs

Loci

20

0.00

miR-512-3p, miR-515-3p, miR-516a-5p, miR-516b-5p, miR-517-5p, miR-517a-3p, miR-517b-3p, miR-518a-3p, miR-518a-5p, miR-518b, miR-518c-3p, miR-518c-5p, miR-518e-3p, miR-518f-3p, miR-518f-5p, miR-519a-3p, miR-519a-5p, miR-519c-3p, miR-520a-3p

19q13.42

5

2.13-6

miR-449a, miR-449b-3p, miR-449b-5p, miR-449c-5p

5q11.2

59

3.29-6

miR-489-3p, miR-653-3p, miR-653-5p

7q21.3

104

3.29-6

miR-221-3p, miR-222-3p, miR-222-5p

Xp11.3

49

7.83-6

miR-34b-3p, miR-34b-5p, miR-34c-5p

11q23.1

110

7.83-6

miR-301a-3p, miR-301a-5p, miR-454-3p

17q22

31

1.55-5

miR-1247-3p, miR-1247-5p

14q32.31

33

1.55-5

miR-10a-3p, miR-10a-5p

17q21.32

58

1.55-5

miR-552-3p, miR-552-5p

1q34.3

56

5.46-5

miR-132-3p, miR-212-3p

17q13.3

2

5.46-5

miR-105-5p, miR-767-3p, miR-767-5p

Xq28

68

5.46-5

miR-153-3p, miR-153-5p

7q36.3

78

1.59-4

miR-1-3p, miR-133a-3p

20q13.33

11

2.14-4

miR-15b-3p, miR-16-5p

3q25.33

76

2.72-4

miR-154-3p, miR-369-3p, miR-376a-3p, miR-409-5p, miR-411-5p, miR-487a-3p, miR-494-3p, miR-758-5p

14q32.31

62

2.96-4

let-7f-5p, miR-98-5p

Xp11.22

44

2.96-4

miR-199a-5p, miR-214-3p, miR-214-5p

1q24.3

95

6.54-4

miR-506-3p, miR-508-3p, miR-509-3p, miR-514a-3p

Xq27.3

35

7.51-4

miR-106a-3p, miR-20b-5p, miR-363-3p

Xq26.2

82

1.37-3

miR-192-3p, miR-194-5p

11q13.1

  1. Index, the index of the comodule; q-value, the corrected p-value of enrichment; Overlap miRNAs, miRNAs in the module overlapping with the spatial cluster; Loci, the chromosomal location of the cluster