Table 2 Evaluation on simulated single-end data
From: Accel-Align: a fast sequence mapper and aligner based on the seed–embed–extend method
BWA-MEM | Bowtie2 | Minimap2 | Subread | Accel-Align | |
|---|---|---|---|---|---|
Exec. time (MM:SS) | 06:47 | 09:35 | 02:50 | 05:09 | 01:01 |
Correctly mapped | 97.36% | 97.23% | 96.51% | 90.1% | 96.75% |
Not mapped | 0.0028% | 0.044% | 0.73% | 9.64% | 0% |