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Table 3 Evaluation on simulated paired-end data

From: Accel-Align: a fast sequence mapper and aligner based on the seed–embed–extend method

 

BWA-MEM

Bowtie2

Minimap2

Subread

Accel-Align

Exec. time (MM:SS)

14:49

19:37

04:58

06:32

01:40

Correctly mapped

98.54%

98.51%

98.09%

92.39%

98.24%

Not mapped

0.002%

0.0034%

0.035%

5.63%

0.049%