Comprehensive machine-learning-based analysis of microRNA–target interactions reveals variable transferability of interaction rules across species

Table 1 Dataset information

Name	Species and cell type/Developmental stage	Experimental method	References
ca1	B. taurus, Madin–Darby bovine kidney (MDBK) cells	CLEAR-CLIP	[20]
ce1	C. elegans, L3 staged worms	Modified iPAR-CLIP	[21]
ce2	C. elegans, Mid-L4 WT (N2) worms	ALG-1 iCLIP endogenous ligation	[22]
h1	Human embryonic kidney293 cells (HEK293)	CLASH	[18]
h2	Human, a mix of 6 datasets	AGO-CLIP endogenous ligation	[21]
h3	Human hepatoma cells (Huh-7.5)	CLEAR-CLIP	[19]
m1	Mouse, a mix of 3 datasets	AGO-CLIP endogenous ligation	[21]
m2	Mouse neuroblastoma N2A cells (ATCC)	CLEAR-CLIP	[19]

ISSN: 1471-2105