Table 9 Feature categories that are used to represent miRNA–target interactions
Category | No. of features | Description | Group |
|---|---|---|---|
Seed features | 13 | Seed composition and properties | High-level |
Free energy | 7 | Free energy of the duplex and the mRNA at different regions | High-level |
mRNA composition | 62 | mRNA composition in the site and flanking regions | High-level |
miRNA pairing | 38 | Binding information at each miRNA position and across the miRNA–target duplex | Low-level |
Site accessibility | 370 | Unpaired probabilities of each base | Low-level |
Total | 490 |