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Fig. 2 | BMC Bioinformatics

Fig. 2

From: GWENA: gene co-expression networks analysis and extended modules characterization in a single Bioconductor package

Fig. 2

Available visualizations in GWENA along the pipeline applied to the aging study on the whole age range. a Modules merge as a bipartite graph from plot_modules_merge function and the genes distribution inside each of them (log scale). b Phenotypic association between the 35 modules and age, sex, BMI, ethnicity, weight. c Manhattan-like enrichment plot (interactive in GWENA) of module 10 on GO, KEGG, Reactome, Transfac, miRTarBase, Human Protein Atlas, CORUM, Human Phenotype ontology, WikiPathways. d Expression profile of module 19 split depending on the correlation sign to the eigengene. e Module 19’s network visualization as a graph with muscle enrichment genes colored in red and others in blue. The zoom focus on ENSG00000158022/ENSG00000107372/ENSG00000265972 and related hub genes

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BMC Bioinformatics

ISSN: 1471-2105

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