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Table 8 Proteins with ≥ 5 epitopes present overall for MHCI and MHCII

From: Proteome-wide analysis of Coxiella burnetii for conserved T-cell epitopes with presentation across multiple host species

GenBank ID

Pos

Peptide

Gene Name

Locus Tag

T-cell Epitope

Location

AAO89610.1

72

YLKKHLESL

 

CBU_0041

MHCI

CYTOPLASM(non-PSE)

AAO89610.1

450

SKKTFSFAKTQALPH

 

CBU_0041

MHCII

CYTOPLASM(non-PSE)

AAO89610.1

453

FSFAKTQAL

 

CBU_0041

MHCI

CYTOPLASM(non-PSE)

AAO89610.1

459

QALPHLWEL

 

CBU_0041

MHCI

CYTOPLASM(non-PSE)

AAO89610.1

523

KVADTHIAF

 

CBU_0041

MHCI

CYTOPLASM(non-PSE)

AAO89757.1

95

HADNIKIVL

 

CBU_0197

MHCI

PSE-Membrane

AAO89757.1

146

NQIEFNHAL

 

CBU_0197

MHCI

PSE-Membrane

AAO89757.1

164

QPYPVNVYL

 

CBU_0197

MHCI

PSE-Membrane

AAO89757.1

374

HVHTPVHRL

 

CBU_0197

MHCI

PSE-Membrane

AAO89757.1

636

RAILKPTTF

 

CBU_0197

MHCI

PSE-Membrane

AAO89757.1

748

VRAIRTMKTSPIVPQ

 

CBU_0197

MHCII

PSE-Membrane

AAO89757.1

754

KTSPIVPQL

 

CBU_0197

MHCI

PSE-Membrane

AAO89774.2

37

RIYRPLFSL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89774.2

59

AADDSTISL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89774.2

283

LAAIIHTKTNVIDDQ

 

CBU_0215

MHCII

PSE-Cellwall

AAO89774.2

354

HMATVITTL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89774.2

420

YLIEKGHHL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89774.2

487

LQYPEDPSL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89774.2

508

YLDELPNYL

 

CBU_0215

MHCI

PSE-Cellwall

AAO89890.1

33

HAASIITTI

thiDE

CBU_0334

MHCI

CYTOPLASM(non-PSE)

AAO89890.1

35

AASIITTITAQNAEQ

thiDE

CBU_0334

MHCII

CYTOPLASM(non-PSE)

AAO89890.1

70

TLPPTVIKL

thiDE

CBU_0334

MHCI

CYTOPLASM(non-PSE)

AAO89890.1

215

SAISSAIAL

thiDE

CBU_0334

MHCI

CYTOPLASM(non-PSE)

AAO89890.1

384

HTLYELSRAHAIQPS

thiDE

CBU_0334

MHCII

CYTOPLASM(non-PSE)

AAO89918.2

6

VQNPTLESL

 

CBU_0364

MHCI

MEMBRANE(non-PSE)

AAO89918.2

173

MAFHLPHAL

 

CBU_0364

MHCI

MEMBRANE(non-PSE)

AAO89918.2

233

AVATPVQKL

 

CBU_0364

MHCI

MEMBRANE(non-PSE)

AAO89918.2

276

KAISPHASL

 

CBU_0364

MHCI

MEMBRANE(non-PSE)

AAO89918.2

281

HASLLKHTL

 

CBU_0364

MHCI

MEMBRANE(non-PSE)

AAO89941.1

421

DSYPIIQSL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89941.1

488

MAFEILEQL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89941.1

1009

SIIERVKAL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89941.1

1009

KSIIERVKALVSVDK

 

CBU_0388

MHCII

CYTOPLASM(non-PSE)

AAO89941.1

1248

VAAPLFMTL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89941.1

1264

RMFAKVFSL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89941.1

1270

FSLPIEVEL

 

CBU_0388

MHCI

CYTOPLASM(non-PSE)

AAO89977.1

9

VVDSKPHEL

 

CBU_0425

MHCI

CYTOPLASM(non-PSE)

AAO89977.1

13

KPHELTLLF

 

CBU_0425

MHCI

CYTOPLASM(non-PSE)

AAO89977.1

37

SQIENLHKIL

 

CBU_0425

MHCI

CYTOPLASM(non-PSE)

AAO89977.1

84

NATDFEYSETQPIET

 

CBU_0425

MHCII

CYTOPLASM(non-PSE)

AAO89977.1

140

SQLFRTIDAILVKTS

 

CBU_0425

MHCII

CYTOPLASM(non-PSE)

AAO89977.1

197

TVYDTTITL

 

CBU_0425

MHCI

CYTOPLASM(non-PSE)

AAO90011.1

58

HTPYLNTIPAETEAQ

pdhA

CBU_0461

MHCII

CYTOPLASM(non-PSE)

AAO90011.1

171

SSYPHPFLM

pdhA

CBU_0461

MHCI

CYTOPLASM(non-PSE)

AAO90011.1

362

DPQKVYAAYTEAMKD

pdhA

CBU_0461

MHCII

CYTOPLASM(non-PSE)

AAO90011.1

508

IRDRIVPIVADEART

pdhA

CBU_0461

MHCII

CYTOPLASM(non-PSE)

AAO90011.1

636

HQDSHNLLM

pdhA

CBU_0461

MHCI

CYTOPLASM(non-PSE)

AAO90011.1

843

AKMVVYTALKALADQ

pdhA

CBU_0461

MHCII

CYTOPLASM(non-PSE)

AAO90093.1

90

IAYDQAIQL

 

CBU_0547

MHCI

CYTOPLASM(non-PSE)

AAO90093.1

124

KAYQKAIAL

 

CBU_0547

MHCI

CYTOPLASM(non-PSE)

AAO90093.1

382

LQYQVPQKL

 

CBU_0547

MHCI

CYTOPLASM(non-PSE)

AAO90093.1

521

SKKYIIALIKRNNFK

 

CBU_0547

MHCII

CYTOPLASM(non-PSE)

AAO90093.1

549

KAIEGYLVL

 

CBU_0547

MHCI

CYTOPLASM(non-PSE)

AAO90130.1

99

FAFKKFYVL

 

CBU_0586

MHCI

CYTOPLASM(non-PSE)

AAO90130.1

574

VQAYYIAQVEKTARR

 

CBU_0586

MHCII

CYTOPLASM(non-PSE)

AAO90130.1

725

RSIFVATGAKPNIAY

 

CBU_0586

MHCII

CYTOPLASM(non-PSE)

AAO90130.1

738

YVYEHKGTF

 

CBU_0586

MHCI

CYTOPLASM(non-PSE)

AAO90130.1

799

HPVFHGSVVKAIASA

 

CBU_0586

MHCII

CYTOPLASM(non-PSE)

AAO90130.1

967

MAAAHLRSL

 

CBU_0586

MHCI

CYTOPLASM(non-PSE)

AAO90130.1

984

GHRVFYVALIEKAEE

 

CBU_0586

MHCII

CYTOPLASM(non-PSE)

AAO90155.1

257

DKKHVYITIHLVEGP

yaeT

CBU_0611

MHCII

PSE-Membrane

AAO90155.1

320

GDRGYAFARVNVIPT

yaeT

CBU_0611

MHCII

PSE-Membrane

AAO90155.1

469

SQYQQNYSF

yaeT

CBU_0611

MHCI

PSE-Membrane

AAO90155.1

550

IAAPSVLAF

yaeT

CBU_0611

MHCI

PSE-Membrane

AAO90155.1

794

FQFSFGVSL

yaeT

CBU_0611

MHCI

PSE-Membrane

AAO90229.1

497

PVDIKYDTNNLAQSA

 

CBU_0685

MHCII

CYTOPLASM(non-PSE)

AAO90229.1

738

VVSPVPPVL

 

CBU_0685

MHCI

CYTOPLASM(non-PSE)

AAO90229.1

784

YAKPILHPM

 

CBU_0685

MHCI

CYTOPLASM(non-PSE)

AAO90229.1

855

SAYPATDRLYF

 

CBU_0685

MHCI

CYTOPLASM(non-PSE)

AAO90229.1

940

TAAEVQWRL

 

CBU_0685

MHCI

CYTOPLASM(non-PSE)

AAO90293.1

97

YGVNVYEVANQIRDK

 

CBU_0753

MHCII

PSE-Membrane

AAO90293.1

265

SADQSIVTL

 

CBU_0753

MHCI

PSE-Membrane

AAO90293.1

453

QAANIFRSF

 

CBU_0753

MHCI

PSE-Membrane

AAO90293.1

602

KAFDSVFAM

 

CBU_0753

MHCI

PSE-Membrane

AAO90293.1

785

VVLPHYNHL

 

CBU_0753

MHCI

PSE-Membrane

AAO90293.1

999

YAYKFKLFL

 

CBU_0753

MHCI

PSE-Membrane

AAO90323.2

57

AANDFAIKL

 

CBU_0789

MHCI

CYTOPLASM(non-PSE)

AAO90323.2

278

QLEIQRQKAEAANKA

 

CBU_0789

MHCII

CYTOPLASM(non-PSE)

AAO90323.2

481

TIFEHFSRL

 

CBU_0789

MHCI

CYTOPLASM(non-PSE)

AAO90323.2

694

EQFIFRAKAEKEAKS

 

CBU_0789

MHCII

CYTOPLASM(non-PSE)

AAO90323.2

816

KAIEAFLKM

 

CBU_0789

MHCI

CYTOPLASM(non-PSE)

ACI15273.1

10

YSSEIPQNL

 

CBU_1067a

MHCI

PSE-Membrane

ACI15273.1

63

IAAPLPIQL

 

CBU_1067a

MHCI

PSE-Membrane

ACI15273.1

105

RQFQPLATL

 

CBU_1067a

MHCI

PSE-Membrane

ACI15273.1

193

AQFTDPITF

 

CBU_1067a

MHCI

PSE-Membrane

ACI15273.1

280

YLKEIVTVL

 

CBU_1067a

MHCI

PSE-Membrane

ACI15273.1

535

FMRDGVLSL

 

CBU_1067a

MHCI

PSE-Membrane

AAO90660.1

70

SADTPILHF

mfd

CBU_1148

MHCI

CYTOPLASM(non-PSE)

AAO90660.1

212

VEKIESVRLLPAREY

mfd

CBU_1148

MHCII

CYTOPLASM(non-PSE)

AAO90660.1

531

KIYVPVSSL

mfd

CBU_1148

MHCI

CYTOPLASM(non-PSE)

AAO90660.1

665

VAVLVPTTL

mfd

CBU_1148

MHCI

CYTOPLASM(non-PSE)

AAO90660.1

768

TATPIPRTL

mfd

CBU_1148

MHCI

CYTOPLASM(non-PSE)

AAO90735.2

42

FIRLYYAHVALEDIK

 

CBU_1226

MHCII

CYTOPLASM(non-PSE)

AAO90735.2

81

EVKIRVFNPQLDRDG

 

CBU_1226

MHCII

CYTOPLASM(non-PSE)

AAO90735.2

160

STLEAPISM

 

CBU_1226

MHCI

CYTOPLASM(non-PSE)

AAO90735.2

339

FIGLYTSDVYRSDPR

 

CBU_1226

MHCII

CYTOPLASM(non-PSE)

AAO90735.2

921

AADKGTATF

 

CBU_1226

MHCI

CYTOPLASM(non-PSE)

AAO90735.2

1015

AAFDHRHIF

 

CBU_1226

MHCI

CYTOPLASM(non-PSE)

AAO90735.2

1484

GTAPLFHAL

 

CBU_1226

MHCI

CYTOPLASM(non-PSE)

AAO90737.1

149

TLYDPATEL

qseC

CBU_1228

MHCI

PSE-Membrane

AAO90737.1

254

EKRFTADAAHELRTP

qseC

CBU_1228

MHCII

PSE-Membrane

AAO90737.1

256

FTADAAHEL

qseC

CBU_1228

MHCI

PSE-Membrane

AAO90737.1

418

RVFERFFRM

qseC

CBU_1228

MHCI

PSE-Membrane

AAO90737.1

467

VTFPLIHNF

qseC

CBU_1228

MHCI

PSE-Membrane

AAO90739.1

8

QALDPQQSF

 

CBU_1230

MHCI

CYTOPLASM(non-PSE)

AAO90739.1

312

RMKDLLSQL

 

CBU_1230

MHCI

CYTOPLASM(non-PSE)

AAO90739.1

411

FQDTSIIQF

 

CBU_1230

MHCI

CYTOPLASM(non-PSE)

AAO90739.1

568

QLIEITPAL

 

CBU_1230

MHCI

CYTOPLASM(non-PSE)

AAO90739.1

581

DIPFHAVEIEKLAHR

 

CBU_1230

MHCII

CYTOPLASM(non-PSE)

AAO90739.1

745

AKNPIQIMTIHKAKG

 

CBU_1230

MHCII

CYTOPLASM(non-PSE)

AAO90739.1

806

KADPVYNYL

 

CBU_1230

MHCI

CYTOPLASM(non-PSE)

AAO90739.1

827

ITRLLYVAATRAKES

 

CBU_1230

MHCII

CYTOPLASM(non-PSE)

AAO90739.1

1038

RWIIDYKSATPNDEP

 

CBU_1230

MHCII

CYTOPLASM(non-PSE)

AAO90751.1

22

FAFINPAEL

 

CBU_1242

MHCI

CYTOPLASM(non-PSE)

AAO90751.1

55

VTIPTGLSF

 

CBU_1242

MHCI

CYTOPLASM(non-PSE)

AAO90751.1

129

RVNDISPEF

 

CBU_1242

MHCI

CYTOPLASM(non-PSE)

AAO90751.1

137

FAFSFSPKF

 

CBU_1242

MHCI

CYTOPLASM(non-PSE)

AAO90751.1

381

NSFAGVTSL

 

CBU_1242

MHCI

CYTOPLASM(non-PSE)

AAO90751.1

381

DNSFAGVTSLGVNRP

 

CBU_1242

MHCII

CYTOPLASM(non-PSE)

AAO90780.1

90

RQYERLIEVF

 

CBU_1273

MHCI

CYTOPLASM(non-PSE)

AAO90780.1

100

KAHDIGYVF

 

CBU_1273

MHCI

CYTOPLASM(non-PSE)

AAO90780.1

159

VAKYIAVSTQEAALD

 

CBU_1273

MHCII

CYTOPLASM(non-PSE)

AAO90780.1

287

NFKYHWAVADYLQRA

 

CBU_1273

MHCII

CYTOPLASM(non-PSE)

AAO90780.1

399

VPDYVTLKNQLVAKK

 

CBU_1273

MHCII

CYTOPLASM(non-PSE)

AAO90853.1

65

SAAGVNIKL

glmM

CBU_1350

MHCI

CYTOPLASM(non-PSE)

AAO90853.1

133

DKPMKTVVADRLGKA

glmM

CBU_1350

MHCII

CYTOPLASM(non-PSE)

AAO90853.1

162

STFPSNLTL

glmM

CBU_1350

MHCI

CYTOPLASM(non-PSE)

AAO90853.1

187

VAPSIFHEL

glmM

CBU_1350

MHCI

CYTOPLASM(non-PSE)

AAO90853.1

364

VMVKHPQVL

glmM

CBU_1350

MHCI

CYTOPLASM(non-PSE)

AAO90878.1

140

KLSERLTTL

relA

CBU_1375

MHCI

CYTOPLASM(non-PSE)

AAO90878.1

193

YLNPNEYSL

relA

CBU_1375

MHCI

CYTOPLASM(non-PSE)

AAO90878.1

280

TALSIVHAL

relA

CBU_1375

MHCI

CYTOPLASM(non-PSE)

AAO90878.1

306

DNGYRSIHTAVIGPE

relA

CBU_1375

MHCII

CYTOPLASM(non-PSE)

AAO90878.1

428

KMVPLTRTL

relA

CBU_1375

MHCI

CYTOPLASM(non-PSE)

AAO90965.2

108

RLFPGHVWL

 

CBU_1468

MHCI

PSE-Membrane

AAO90965.2

168

NIDIYYHTAEGQLIP

 

CBU_1468

MHCII

PSE-Membrane

AAO90965.2

235

SQWESSYFL

 

CBU_1468

MHCI

PSE-Membrane

AAO90965.2

366

YQPKRIQTLF

 

CBU_1468

MHCI

PSE-Membrane

AAO90965.2

567

QLRIVASHANISGNP

 

CBU_1468

MHCII

PSE-Membrane

AAO90965.2

608

ANGFKFLKAAPLSVA

 

CBU_1468

MHCII

PSE-Membrane

AAO90965.2

700

PIAFHIATLNPSSQS

 

CBU_1468

MHCII

PSE-Membrane

AAO90965.2

951

KQWKITHAL

 

CBU_1468

MHCI

PSE-Membrane

AAO90965.2

951

LKQWKITHALEGGKG

 

CBU_1468

MHCII

PSE-Membrane

AAO90990.2

255

KPYEPILNL

 

CBU_1493

MHCI

CYTOPLASM(non-PSE)

AAO90990.2

369

MASPHVASL

 

CBU_1493

MHCI

CYTOPLASM(non-PSE)

AAO90990.2

426

YPPRIVANTVAFNAK

 

CBU_1493

MHCII

CYTOPLASM(non-PSE)

AAO90990.2

486

KEILYGIETHPNPSP

 

CBU_1493

MHCII

CYTOPLASM(non-PSE)

AAO90990.2

494

HPNPSPTIF

 

CBU_1493

MHCI

CYTOPLASM(non-PSE)

AAO91128.1

103

RQAQGIYYF

icmO

CBU_1632

MHCI

PSE-Membrane

AAO91128.1

174

KVFSIVRSM

icmO

CBU_1632

MHCI

PSE-Membrane

AAO91128.1

447

YAVEGFAVVPAQARS

icmO

CBU_1632

MHCII

PSE-Membrane

AAO91128.1

571

VRGKFFYADPKRTKH

icmO

CBU_1632

MHCII

PSE-Membrane

AAO91128.1

734

QAMNIAVEL

icmO

CBU_1632

MHCI

PSE-Membrane

AAO91182.1

46

AQADRIYEM

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

50

RIYEMLQQL

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

201

KQIPLITRY

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

224

SILDVFLQL

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

265

RLIDNRFSF

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

512

SQQEKTIQL

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91182.1

618

SVNEHANQF

 

CBU_1686

MHCI

CYTOPLASM(non-PSE)

AAO91357.1

259

GEIVITALPHQVSGN

parC

CBU_1866

MHCII

CYTOPLASM(non-PSE)

AAO91357.1

376

FVIERLHLL

parC

CBU_1866

MHCI

CYTOPLASM(non-PSE)

AAO91357.1

439

EKKIRDEQAILTKER

parC

CBU_1866

MHCII

CYTOPLASM(non-PSE)

AAO91357.1

516

KGWIRAAKGHEVEGE

parC

CBU_1866

MHCII

CYTOPLASM(non-PSE)

AAO91357.1

678

GNKIIQIAPARVANR

parC

CBU_1866

MHCII

CYTOPLASM(non-PSE)

AAO91357.1

739

PRGFRKVDNVAVDEN

parC

CBU_1866

MHCII

CYTOPLASM(non-PSE)

AAO91378.1

79

PKPLIHAVLATEDAR

ponA

CBU_1887

MHCII

PSE-Membrane

AAO91378.1

103

ISIIRAAKAVILTGK

ponA

CBU_1887

MHCII

PSE-Membrane

AAO91378.1

253

TAKYHAATTQVKAPY

ponA

CBU_1887

MHCII

PSE-Membrane

AAO91378.1

539

YAIEYLTRF

ponA

CBU_1887

MHCI

PSE-Membrane

AAO91378.1

552

NVLPHSLSL

ponA

CBU_1887

MHCI

PSE-Membrane

AAO91393.1

104

TADDFTVYF

 

CBU_1902

MHCI

SECRETED

AAO91393.1

116

SADQLPVAF

 

CBU_1902

MHCI

SECRETED

AAO91393.1

286

YALDVLSTL

 

CBU_1902

MHCI

SECRETED

AAO91393.1

365

EEELKRVKAQVIAQN

 

CBU_1902

MHCII

SECRETED

AAO91393.1

410

VKNIEAVTAQQIQQV

 

CBU_1902

MHCII

SECRETED

AAO91419.2

10

QVISLTHQF

 

CBU_1928

MHCI

PSE-Membrane

AAO91419.2

297

SAYGKTLNM

 

CBU_1928

MHCI

PSE-Membrane

AAO91419.2

504

IQFKGPSAM

 

CBU_1928

MHCI

PSE-Membrane

AAO91419.2

594

TEKLIIVAETKEDKK

 

CBU_1928

MHCII

PSE-Membrane

AAO91419.2

667

SAFWQTIKL

 

CBU_1928

MHCI

PSE-Membrane

AAO91455.1

145

TKRIRSETAIGANPV

hemA

CBU_1966

MHCII

CYTOPLASM(non-PSE)

AAO91455.1

157

NPVSIAYAVVQLAKR

hemA

CBU_1966

MHCII

CYTOPLASM(non-PSE)

AAO91455.1

227

RLSDIPTYL

hemA

CBU_1966

MHCI

CYTOPLASM(non-PSE)

AAO91455.1

383

ILHQPTTKL

hemA

CBU_1966

MHCI

CYTOPLASM(non-PSE)

AAO91455.1

394

AAYEDQVQL

hemA

CBU_1966

MHCI

CYTOPLASM(non-PSE)

AAO91467.1

163

VADKGTLTL

ostA

CBU_1978

MHCI

SECRETED

AAO91467.1

170

TLYPKTAIL

ostA

CBU_1978

MHCI

SECRETED

AAO91467.1

615

FSFEQLFAL

ostA

CBU_1978

MHCI

SECRETED

AAO91467.1

730

KADIRYLFVHGNEDS

ostA

CBU_1978

MHCII

SECRETED

AAO91467.1

832

TAYGFELQL

ostA

CBU_1978

MHCI

SECRETED

  1. The epitope type is defined in the T-cell epitope column. Protein information is outlined in the following columns: GenBank ID, gene name, and locus tag, where this information is defined through Nine Mile Phase I (RSA 493) assembly on NCBI. Pos dictates the peptides starting position within the protein of interest and location was defined through the use of Inmembrane