Table 6 The scoring matrix [17] for the positive strand and overlapping unique reads. Different types of match and mismatch scores are different
From: An effective method to resolve ambiguous bisulfite-treated reads
| Â | A | C | G | T | N |
|---|---|---|---|---|---|
A | 6 | − 18 | − 18 | − 18 | − 25 |
C | − 18 | 6 | − 18 | 3 | − 25 |
G | − 18 | − 18 | 6 | − 18 | − 25 |
T | − 18 | − 18 | − 18 | 3 | − 25 |
N | − 25 | − 25 | − 25 | − 25 | 25 |