From: Contrastive self-supervised clustering of scRNA-seq data
 | Dataset name | KMeans | Leidena | Birch | GMM | MeanShifta | Spectral Clustering | Hierarchical Clustering |
---|---|---|---|---|---|---|---|---|
1 | Quake Smart seq2 Trachea | 0.86 | 0.3 | 0.87 | 0.88 | 0.78 | 0.84 | 0.89 |
2 | Quake10 × Bladder | 0.75 | 0.29 | 0.75 | 0.75 | 0.72 | 0.75 | 0.75 |
3 | Quake10 × Spleen | 0.91 | 0.17 | 0.72 | 0.74 | 0.84 | 0.83 | 0.9 |
4 | Quake Smart seq2 Diaphragm | 0.98 | 0.7 | 0.98 | 0.98 | 0.96 | 0.98 | 0.98 |
5 | Quake10 × Limb Muscle | 0.99 | 0.58 | 0.9 | 0.91 | 0.69 | 0.96 | 0.99 |
6 | Quake Smart seq2 Limb Muscle | 0.98 | 0.67 | 0.97 | 0.92 | 0.92 | 0.97 | 0.98 |
7 | Romanov | 0.73 | 0.49 | 0.52 | 0.48 | 0.62 | 0.73 | 0.69 |
8 | Adam | 0.83 | 0.67 | 0.64 | 0.61 | 0.54 | 0.84 | 0.8 |
9 | Muraro | 0.91 | 0.57 | 0.85 | 0.85 | 0.83 | 0.85 | 0.92 |
10 | Young | 0.66 | 0.68 | 0.57 | 0.6 | 0.39 | 0.65 | 0.65 |
11 | Quake Smart seq2 Lung | 0.59 | 0.49 | 0.59 | 0.49 | 0.48 | 0.57 | 0.6 |
12 | 10 PBMC | 0.7 | 0.51 | 0.61 | 0.6 | 0.66 | 0.66 | 0.69 |
13 | Mouse ES cells | 0.73 | 0.52 | 0.64 | 0.64 | 0.69 | 0.72 | 0.74 |
14 | Worm neuron cell | 0.49 | 0.49 | 0.34 | 0.36 | 0.15 | 0.47 | 0.49 |
15 | Mouse bladder cell | 0.46 | 0.56 | 0.53 | 0.5 | 0.51 | 0.42 | 0.44 |
 | Average score | 0.77 | 0.51 | 0.70 | 0.69 | 0.65 | 0.75 | 0.77 |