Skip to main content

Table 3 Sorghum study analysis results: features with a significant effect on sorghum root ODPA production in the study population with FDR control at the 0.05 level using the Benjamini–Hochberg (BH) procedure on the debiased LASSO estimate following sure independence screening (iterative SIS)

From: Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization

 

Standardized

Conditional: high N

Conditional: low N

Feature

Estimate

q-value

Estimate

q-value

Mean (SD)

Estimate

q-value

Mean (SD)

Order

3.18

\(<0.001\)

6.36

\(<0.001\)

56.8 (10.6)

0.00

1.000

52.5 (10.2)

Rhodocyclales

Family

4.68

\(<0.001\)

0.00

1.000

13.4 (4.0)

9.37

\(<0.001\)

5.1 (2.2)

Rhodospirillaceae

Genus

3.72

\(<0.001\)

7.45

\(<0.001\)

6.9 (6.5)

0.00

1.000

1.6 (1.5)

Massilia

Unnamed order

1.53

0.001

3.06

0.001

6.7 (3.5)

0.00

1.000

10.9 (5.8)

Sva0725