Table 1 Multi-to-Multi Scenario: Number of patients initially clustered by ClustOmics, number of patients reassigned to consensus clusters, number of supports used to filter the integration graph, number of consensus clusters generated by ClustOmics and COCA, and average number of clusters in input clusterings
From: Consensus clustering applied to multi-omics disease subtyping
Cancer | # patients clustered | # patients reassigned | # supports threshold | # clusters ClustOmics | # clusters COCA | Avg # clusters inputs |
|---|---|---|---|---|---|---|
AML | 165 | 5 | 4 | 6 | 3 | 4.6 |
BIC | 619 | 2 | 4 | 5 | 2 | 4.0 |
COAD | 220 | 0 | 2 | 3 | 3 | 5.2 |
GBM | 267 | 7 | 4 | 3 | 3 | 3.4 |
KIRC | 176 | 7 | 3 | 3 | 3 | 4.2 |
LIHC | 363 | 4 | 4 | 5 | 2 | 3.2 |
LUSC | 341 | 0 | 2 | 2 | 2 | 3.4 |
OV | 285 | 2 | 4 | 5 | 2 | 3.4 |
SARC | 257 | 0 | 3 | 3 | 3 | 3.4 |
SKCM | 351 | 0 | 3 | 5 | 3 | 4.8 |