Table 3 Single-to-Multi All Scenario: Total population size (which are multi-omics), number of patients clustered or reassigned to consensus clusters (which are multi-omics), number of supports used to filter the graph, number of clusters generated by ClustOmics, number of clusters generated by COCA, and average number of clusters in the input clusterings
From: Consensus clustering applied to multi-omics disease subtyping
Cancer | Total (multi-omics) | Clustered (multi-omics) | Reassigned (multi-omics) | # supports threshold | # clusters ClustOmics | # clusters COCA | Avg # clusters inputs |
|---|---|---|---|---|---|---|---|
AML | 197 (170) | 176 (163) | 21 (7) | 8 | 7 | 4 | 6.60 |
BIC | 1096 (621) | 600 (600) | 496 (21) | 11 | 6 | 2 | 3.87 |
COAD | 303 (220) | 276 (220) | 27 (0) | 7 | 6 | 4 | 3.47 |
GBM | 578 (274) | 434 (262) | 144 (12) | 9 | 11 | 2 | 4.13 |
KIRC | 534 (183) | 316 (174) | 218 (9) | 9 | 9 | 2 | 4.07 |
LIHC | 377 (367) | 363 (354) | 14 (13) | 8 | 5 | 2 | 4.73 |
LUSC | 501 (341) | 337 (321) | 164 (20) | 8 | 4 | 2 | 4.73 |
OV | 591 (287) | 393 (272) | 198 (15) | 9 | 9 | 2 | 3.47 |
SARC | 261 (257) | 261 (257) | 0 (0) | 8 | 3 | 3 | 4.33 |
SKCM | 368 (351) | 345 (329) | 23 (22) | 8 | 6 | 4 | 4.67 |