Skip to main content
Fig. 11 | BMC Bioinformatics

Fig. 11

From: Accurate plant pathogen effector protein classification ab initio with deepredeff: an ensemble of convolutional neural networks

Fig. 11

Grad-CAM activation profiles of CNN-LSTM models when run with all datasets showing the region of the sequence the model is most able to use to classify (leftmost panel). The most active part of the sequences are shown in logo plots of sequences extracted from the activation region within the dotted lines for effector data (centre panel) and non-effector data (rightmost panel). A Models trained on bacterial sequences; B Models trained on fungal sequences; C Models trained on oomycete sequences

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us