A neural network-based method for polypharmacy side effects prediction

BMC Bioinformatics

Table 6 The results for three dimension reduction techniques for 964 side effects

Dimension reduction techniques	TP	FP	TN	FN	AUROC	AUPRC	Precision	Recall	F-score	ACC	MCC
PCA	105,153	12,013	95,955	2608	0.966	0.953	0.901	0.976	0.936	0.934	0.872
Low variance filter	104,830	12,667	95,119	3113	0.963	0.952	0.899	0.972	0.933	0.931	0.866
Autoencoder	104,498	13,087	94,827	3317	0.963	0.950	0.897	0.971	0.931	0.929	0.862

ISSN: 1471-2105