From: HELLO: improved neural network architectures and methodologies for small variant calling
 | GATK | DeepVariant | HELLO | ||||||
---|---|---|---|---|---|---|---|---|---|
Precision | Recall | Errors | Precision | Recall | Errors | Precision | Recall | Errors | |
20x | 0.975429 | 0.956826 | 34,098 | 0.976854 | 0.968963 | 27,455 | 0.984478 | 0.972669 | 21,619 |
30x | 0.986186 | 0.981593 | 16,367 | 0.989031 | 0.987899 | 11,763 | 0.992588 | 0.989808 | 8938 |