Skip to main content

Table 17 Indel results for HG001 WGS, Hybrid

From: HELLO: improved neural network architectures and methodologies for small variant calling

 

DeepVariant

HELLO

Precision

Recall

Errors

Precision

Recall

Errors

20 × 15x

0.984914

0.986604

14,582

0.990969

0.991731

8840

20 × 30x

0.986462

0.990168

12,013

0.993106

0.994709

6242

30 × 15x

0.990535

0.992549

8676

0.993668

0.995411

5598

30 × 30x

0.990507

0.993720

8114

0.994388

0.996606

4627

  1. Values in bold indicate the best operating point for each tool for the corresponding metric
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us