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Table 1 AliStat completeness metrics for the Reference MSA

From: A globally diverse reference alignment and panel for imputation of mitochondrial DNA variants

Feature

Value(s)

Sequences

44,299

Sites

16,569

Completeness score (Ca)

0.9997

C-score for individual sequences (Cr) [min–max]

0.9119–1.0000

C-score for individual sites (Cc) [min–max]

0.4429–1.0000

C-score for pairs of sequences (Cij, i ≠ j) [min–max]

0.8314–1.0000

  1. Ca: completeness of the alignment; Cr: completeness of the rth sequence; Cc; completeness of the cth site; and Cij: completeness of the ith and jth sequences