From: DELEAT: gene essentiality prediction and deletion design for bacterial genome reduction
Organism | DEG id | RefSeq |
---|---|---|
Acinetobacter baumannii ATCC 17978 | DEG1043 | NC_009085 |
Acinetobacter baylyi ADP1 | DEG1013 | NC_005966 |
Agrobacterium fabrum str. C58 | DEG1045 | NC_003062 |
Bacillus subtilis 168 | DEG1001 | NC_000964 |
Bacteroides fragilis 638R | DEG1034 | NC_016776 |
Bacteroides thetaiotaomicron VPI-5482 | DEG1023 | NC_004663 |
Brevundimonas subvibrioides ATCC 15264 | DEG1046 | NC_014375 |
Burkholderia pseudomallei K96243 | DEG1035 | NC_006350; NC_006351 |
Burkholderia thailandensis E264 | DEG1024 | NC_007650; NC_007651 |
Campylobacter jejuni subsp. jejuni 81-176 | DEG1050 | NC_008787 |
Caulobacter crescentus | DEG1020 | NC_011916 |
Escherichia coli MG1655 II | DEG1019 | NC_000913 |
Francisella novicida U112 | DEG1012 | NC_008601 |
Haemophilus influenzae Rd KW20 | DEG1005 | NC_000907 |
Helicobacter pylori 26695 | DEG1008 | NC_000915 |
Mycobacterium tuberculosis H37Rv III | DEG1027 | NC_000962 |
Mycoplasma genitalium G37 | DEG1006 | NC_000908 |
Mycoplasma pulmonis UAB CTIP | DEG1014 | NC_002771 |
Porphyromonas gingivalis ATCC 33277 | DEG1039 | NC_010729 |
Pseudomonas aeruginosa PAO1 | DEG1036 | NC_002516 |
Rhodopseudomonas palustris CGA009 | DEG1041 | NC_005296 |
Salmonella enterica serovar Typhi Ty2 | DEG1033 | NC_004631 |
Salmonella enterica serovar Typhimurium SL1344 | DEG1032 | NC_016810 |
Sphingomonas wittichii RW1 | DEG1028 | NC_009511 |
Staphylococcus aureus NCTC 8325 | DEG1017 | NC_007795 |
Streptococcus agalactiae A909 | DEG1042 | NC_007432 |
Streptococcus pyogenes NZ131 | DEG1038 | NC_011375 |
Streptococcus sanguinis | DEG1021 | NC_009009 |
Synechococcus elongatus PCC 7942 | DEG1040 | NC_007604 |
Vibrio cholerae N16961 | DEG1003 | NC_002505; NC_002506 |