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Table 2 Performance of GO annotation prediction in each training set

From: KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases

GO domain

Model

Accuracy

Precision

Recall

F-measure

AUC

Biological process

Logistic regression

0.896

0.942

0.844

0.891

0.914

SVM

0.896

0.943

0.843

0.890

0.896

Random forest

0.909

0.944

0.869

0.905

0.923

Cellular component

Logistic regression

0.908

0.955

0.856

0.903

0.924

SVM

0.908

0.955

0.858

0.903

0.908

Random forest

0.921

0.959

0.880

0.918

0.932

Molecular function

Logistic regression

0.940

0.959

0.919

0.939

0.961

SVM

0.942

0.959

0.925

0.941

0.942

Random forest

0.955

0.964

0.945

0.955

0.965

  1. The best performance in each measurement and each GO domain is highlighted in underlined