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Fig. 3 | BMC Bioinformatics

Fig. 3

From: In silico vaccine design and epitope mapping of New Delhi metallo-beta-lactamase (NDM): an immunoinformatics approach

Fig. 3

The results of prediction of HLA-DR, HLA-DQ, and HLA-DP epitopes by the IEDB Consensus method; the lower adjusted rank indicates good binder epitopes. The epitope length was defined as 15 residues (15 mer) and each peptide is named by a number equals to the median values of the respective peptide sequence number; e.g. the 1–15 peptide is named core of peptide 8. In HLA-DR epitopes, peptide cores 208, 207, 210, 209, and 11, in HLA-DQ epitopes peptide cores 193, 98, 96, 192, and 97 and in HLA-DP epitopes 10, 22, 8, 9, and 23 demonstrated the lowest adjusted rank which implies that they are top good binder epitopes

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