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Fig. 4 | BMC Bioinformatics

Fig. 4

From: rKOMICS: an R package for processing mitochondrial minicircle assemblies in population-scale genome projects

Fig. 4

a Boxplot as obtained with rKOMICS function msc.richness summarizing the number of Minicircle Sequence Classes (MSCs) for various percent identity thresholds (80%, 85%, 87–100%). b Barplot obtained with rKOMICS function msc.similarity showing the proportion of minicircle sequence classes that are unique or shared between L. braziliensis, L. peruviana and their hybrids, for each percent identity threshold used during the clustering analyses. c Principal Component Analysis as obtained with function msc.pca based on sequence similarity between MSCs at 97% identity

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